USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

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Searching in 'USC-OGP 2-DE database' for entry matching: COPE_HUMAN USC-OGP 2-DE database:  COPE_HUMAN COPE_HUMAN General information about the entry View entry in simple text format Entry name COPE_HUMAN Primary accession number O14579 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Coatomer subunit epsilon; AltName: Full=Epsilon-coat protein; Short=Epsilon-COP;. Gene name Name=COPE Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein PLATELET_4-5 {PLATELET 4-5} Homo sapiens (Human)   map experimental info   PLATELET_4-5 MAP LOCATIONS: SPOT OGP-0150: pI=5.00; Mw=31212 Cross-references UniProtKB/Swiss-Prot O14579; COPE_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name COPE_HUMAN Primary accession number O14579 Secondary accession number(s) A6NE29 A6NKA3 O76097 Q6IBB8 Q9UGP6 Sequence was last modified on  January 23, 2007 (version 3) Annotations were last modified on  March 15, 2017 (version 150) Name and origin of the protein Description RecName: Full=Coatomer subunit epsilon; AltName: Full=Epsilon-coat protein; Short=Epsilon-COP; Gene name Name=COPE Encoded on Name=COPE Keywords Alternative splicing; Complete proteome; Cytoplasm; Cytoplasmic vesicle; Direct protein sequencing; ER-Golgi transport; Golgi apparatus; Membrane; Phosphoprotein; Polymorphism; Protein transport; Reference proteome; Transport; Ubl conjugation. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AJ131182; CAA10316.1; -; mRNA EMBL AJ249366; CAB55628.1; -; mRNA EMBL AL136928; CAB66862.1; -; mRNA EMBL AK126476; BAG54333.1; -; mRNA EMBL AK315281; BAG37690.1; -; mRNA EMBL CR456886; CAG33167.1; -; mRNA EMBL AC002985; AAB81543.1; -; Genomic_DNA EMBL AC005197; AAC24612.1; -; Genomic_DNA EMBL CH471106; EAW84749.1; -; Genomic_DNA EMBL CH471106; EAW84752.1; -; Genomic_DNA EMBL CH471106; EAW84756.1; -; Genomic_DNA EMBL BC003155; AAH03155.1; -; mRNA EMBL BC007250; AAH07250.1; -; mRNA EMBL BC017285; AAH17285.1; -; mRNA EMBL BM454494; -; NOT_ANNOTATED_CDS; mRNA CCDS CCDS12387.1; -. [O14579-1]; . CCDS CCDS12388.1; -. [O14579-2]; . CCDS CCDS12389.1; -. [O14579-3]; . RefSeq NP_009194.2; NM_007263.3. [O14579-1]; . RefSeq NP_955474.1; NM_199442.1. [O14579-2]; . RefSeq NP_955476.1; NM_199444.1. [O14579-3]; . UniGene Hs.10326; -; . ProteinModelPortal O14579; -; . SMR O14579; -; . BioGrid 116447; 54; . IntAct O14579; 27; . MINT MINT-5000768; -; . STRING 9606.ENSP00000262812; -; . iPTMnet O14579; -; . PhosphoSitePlus O14579; -; . SwissPalm O14579; -; . BioMuta COPE; -; . OGP O14579; -; . EPD O14579; -; . MaxQB O14579; -; . PaxDb O14579; -; . PeptideAtlas O14579; -; . PRIDE O14579; -; . DNASU 11316; -; . Ensembl ENST00000262812; ENSP00000262812; ENSG00000105669. [O14579-1]; . Ensembl ENST00000349893; ENSP00000343134; ENSG00000105669. [O14579-3]; . Ensembl ENST00000351079; ENSP00000345674; ENSG00000105669. [O14579-2]; . GeneID 11316; -; . KEGG hsa:11316; -; . UCSC uc002nkk.4; human. [O14579-1]; . CTD 11316; -; . DisGeNET 11316; -; . GeneCards COPE; -; . HGNC HGNC:2234; COPE; . HPA CAB034345; -; . HPA HPA041605; -; . HPA HPA043576; -; . MIM 606942; gene; . neXtProt NX_O14579; -; . OpenTargets ENSG00000105669; -; . PharmGKB PA26750; -; . eggNOG KOG3081; Eukaryota; . eggNOG ENOG410XS5P; LUCA; . GeneTree ENSGT00390000003478; -; . HOGENOM HOG000205825; -; . HOVERGEN HBG002201; -; . InParanoid O14579; -; . KO K17268; -; . PhylomeDB O14579; -; . TreeFam TF313390; -; . Reactome R-HSA-6807878; COPI-mediated anterograde transport; . Reactome R-HSA-6811434; COPI-dependent Golgi-to-ER retrograde traffic; . ChiTaRS COPE; human; . GeneWiki COPE_(gene); -; . GenomeRNAi 11316; -; . PRO PR:O14579; -; . Proteomes UP000005640; Chromosome 19; . Bgee ENSG00000105669; -; . CleanEx HS_COPE; -; . ExpressionAtlas O14579; baseline and differential; . Genevisible O14579; HS; . GO GO:0030126; C:COPI vesicle coat; ISS:UniProtKB; . GO GO:0005829; C:cytosol; TAS:Reactome; . GO GO:0005789; C:endoplasmic reticulum membrane; TAS:Reactome; . GO GO:0005794; C:Golgi apparatus; IDA:LIFEdb; . GO GO:0000139; C:Golgi membrane; TAS:Reactome; . GO GO:0005654; C:nucleoplasm; IDA:HPA; . GO GO:0030133; C:transport vesicle; TAS:Reactome; . GO GO:0005198; F:structural molecule activity; IEA:InterPro; . GO GO:0006888; P:ER to Golgi vesicle-mediated transport; IBA:GO_Central; . GO GO:0006891; P:intra-Golgi vesicle-mediated transport; ISS:UniProtKB; . GO GO:0015031; P:protein transport; IEA:UniProtKB-KW; . GO GO:0006890; P:retrograde vesicle-mediated transport; Golgi to ER; IBA:GO_Central Gene3D 1.25.40.10; -; 1; . InterPro IPR006822; Coatomer_esu; . InterPro IPR011990; TPR-like_helical_dom; . PANTHER PTHR10805; PTHR10805; 1; . PIRSF PIRSF016478; Coatomer_esu; 1; . SUPFAM SSF48452; SSF48452; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
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• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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